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miRNA
Disease
Process
Function
Gene
Tissue
Constraints
Category:
miRNA
Gene
Disease
Processes
Functions
Tissue (Pre-miRNA)
Tissue (Mature miRNA)
Name:
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Terms in AND
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Sources:
Validated
TargetScan
Pictar
MiRanda
in AND
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Data Mining
Query the database to extract non-trivial subsets of miRNAs sharing some features. The system will compute all the maximal subsets of the specified miRNAs associated to groups of Processes or Broad Phenotypes (Diseases).
Select up to 5 miRNAs by typing or picking them from the list, or browse all miRNA subsets:
miRNAs
hsa-let-7a
hsa-let-7a*
hsa-let-7b
hsa-let-7b*
hsa-let-7c
hsa-let-7c*
hsa-let-7d
hsa-let-7d*
hsa-let-7e
hsa-let-7e*
hsa-let-7f
hsa-let-7f-1*
hsa-let-7f-2*
hsa-let-7g
hsa-let-7g*
hsa-let-7i
hsa-let-7i*
hsa-miR-1
hsa-miR-100
hsa-miR-100*
hsa-miR-101
hsa-miR-101*
hsa-miR-103
hsa-miR-103-as
hsa-miR-105
hsa-miR-105*
hsa-miR-106a
hsa-miR-106a*
hsa-miR-106b
hsa-miR-106b*
hsa-miR-107
hsa-miR-10a
hsa-miR-10a*
hsa-miR-10b
hsa-miR-10b*
hsa-miR-1178
hsa-miR-1179
hsa-miR-1180
hsa-miR-1181
hsa-miR-1182
hsa-miR-1183
hsa-miR-1184
hsa-miR-1185
hsa-miR-1197
hsa-miR-1200
hsa-miR-1201
hsa-miR-1202
hsa-miR-1203
hsa-miR-1204
hsa-miR-1205
hsa-miR-1206
hsa-miR-1207-3p
hsa-miR-1207-5p
hsa-miR-1208
hsa-miR-122
hsa-miR-122*
hsa-miR-1224-3p
hsa-miR-1224-5p
hsa-miR-1225-3p
hsa-miR-1225-5p
hsa-miR-1226
hsa-miR-1226*
hsa-miR-1227
hsa-miR-1228
hsa-miR-1228*
hsa-miR-1229
hsa-miR-1231
hsa-miR-1233
hsa-miR-1234
hsa-miR-1236
hsa-miR-1237
hsa-miR-1238
hsa-miR-124
hsa-miR-124*
hsa-miR-1243
hsa-miR-1244
hsa-miR-1245
hsa-miR-1246
hsa-miR-1247
hsa-miR-1248
hsa-miR-1249
hsa-miR-1250
hsa-miR-1251
hsa-miR-1252
hsa-miR-1253
hsa-miR-1254
hsa-miR-1255a
hsa-miR-1255b
hsa-miR-1256
hsa-miR-1257
hsa-miR-1258
hsa-miR-1259
hsa-miR-125a-3p
hsa-miR-125a-5p
hsa-miR-125b
hsa-miR-125b-1*
hsa-miR-125b-2*
hsa-miR-126
hsa-miR-126*
hsa-miR-1260
hsa-miR-1261
hsa-miR-1262
hsa-miR-1263
hsa-miR-1264
hsa-miR-1265
hsa-miR-1266
hsa-miR-1267
hsa-miR-1268
hsa-miR-1269
hsa-miR-127-3p
hsa-miR-127-5p
hsa-miR-1270
hsa-miR-1271
hsa-miR-1272
hsa-miR-1273
hsa-miR-1274a
hsa-miR-1274b
hsa-miR-1275
hsa-miR-1276
hsa-miR-1277
hsa-miR-1278
hsa-miR-1279
hsa-miR-128
hsa-miR-1280
hsa-miR-1281
hsa-miR-1282
hsa-miR-1283
hsa-miR-1284
hsa-miR-1285
hsa-miR-1286
hsa-miR-1287
hsa-miR-1288
hsa-miR-1289
hsa-miR-129*
hsa-miR-129-3p
hsa-miR-129-5p
hsa-miR-1290
hsa-miR-1291
hsa-miR-1292
hsa-miR-1293
hsa-miR-1294
hsa-miR-1295
hsa-miR-1296
hsa-miR-1297
hsa-miR-1298
hsa-miR-1299
hsa-miR-1300
hsa-miR-1301
hsa-miR-1302
hsa-miR-1303
hsa-miR-1304
hsa-miR-1305
hsa-miR-1306
hsa-miR-1307
hsa-miR-1308
hsa-miR-130a
hsa-miR-130a*
hsa-miR-130b
hsa-miR-130b*
hsa-miR-132
hsa-miR-132*
hsa-miR-1321
hsa-miR-1322
hsa-miR-1323
hsa-miR-1324
hsa-miR-133a
hsa-miR-133b
hsa-miR-134
hsa-miR-135a
hsa-miR-135a*
hsa-miR-135b
hsa-miR-135b*
hsa-miR-136
hsa-miR-136*
hsa-miR-137
hsa-miR-138
hsa-miR-138-1*
hsa-miR-138-2*
hsa-miR-139-3p
hsa-miR-139-5p
hsa-miR-140-3p
hsa-miR-140-5p
hsa-miR-141
hsa-miR-141*
hsa-miR-142-3p
hsa-miR-142-5p
hsa-miR-143
hsa-miR-143*
hsa-miR-144
hsa-miR-144*
hsa-miR-145
hsa-miR-145*
hsa-miR-1468
hsa-miR-1469
hsa-miR-146a
hsa-miR-146a*
hsa-miR-146b-3p
hsa-miR-146b-5p
hsa-miR-147
hsa-miR-1470
hsa-miR-1471
hsa-miR-147b
hsa-miR-148a
hsa-miR-148a*
hsa-miR-148b
hsa-miR-148b*
hsa-miR-149
hsa-miR-149*
hsa-miR-150
hsa-miR-150*
hsa-miR-151-3p
hsa-miR-151-5p
hsa-miR-152
hsa-miR-153
hsa-miR-1537
hsa-miR-1538
hsa-miR-1539
hsa-miR-154
hsa-miR-154*
hsa-miR-155
hsa-miR-155*
hsa-miR-15a
hsa-miR-15a*
hsa-miR-15b
hsa-miR-15b*
hsa-miR-16
hsa-miR-16-1*
hsa-miR-16-2*
hsa-miR-17
hsa-miR-17*
hsa-miR-181a
hsa-miR-181a*
hsa-miR-181a-2*
hsa-miR-181b
hsa-miR-181c
hsa-miR-181c*
hsa-miR-181d
hsa-miR-182
hsa-miR-182*
hsa-miR-1825
hsa-miR-1826
hsa-miR-1827
hsa-miR-183
hsa-miR-183*
hsa-miR-184
hsa-miR-185
hsa-miR-185*
hsa-miR-186
hsa-miR-186*
hsa-miR-187
hsa-miR-187*
hsa-miR-188-3p
hsa-miR-188-5p
hsa-miR-18a
hsa-miR-18a*
hsa-miR-18b
hsa-miR-18b*
hsa-miR-190
hsa-miR-1908
hsa-miR-1909
hsa-miR-1909*
hsa-miR-190b
hsa-miR-191
hsa-miR-191*
hsa-miR-1910
hsa-miR-1911
hsa-miR-1911*
hsa-miR-1912
hsa-miR-1913
hsa-miR-1914
hsa-miR-1914*
hsa-miR-1915
hsa-miR-1915*
hsa-miR-192
hsa-miR-192*
hsa-miR-193a-3p
hsa-miR-193a-5p
hsa-miR-193b
hsa-miR-193b*
hsa-miR-194
hsa-miR-194*
hsa-miR-195
hsa-miR-195*
hsa-miR-196a
hsa-miR-196a*
hsa-miR-196b
hsa-miR-197
hsa-miR-198
hsa-miR-199a-3p
hsa-miR-199a-5p
hsa-miR-199b-3p
hsa-miR-199b-5p
hsa-miR-19a
hsa-miR-19a*
hsa-miR-19b
hsa-miR-19b-1*
hsa-miR-19b-2*
hsa-miR-200a
hsa-miR-200a*
hsa-miR-200b
hsa-miR-200b*
hsa-miR-200c
hsa-miR-200c*
hsa-miR-202
hsa-miR-202*
hsa-miR-203
hsa-miR-204
hsa-miR-205
hsa-miR-206
hsa-miR-208a
hsa-miR-208b
hsa-miR-20a
hsa-miR-20a*
hsa-miR-20b
hsa-miR-20b*
hsa-miR-21
hsa-miR-21*
hsa-miR-210
hsa-miR-211
hsa-miR-212
hsa-miR-214
hsa-miR-214*
hsa-miR-215
hsa-miR-216a
hsa-miR-216b
hsa-miR-217
hsa-miR-218
hsa-miR-218-1*
hsa-miR-218-2*
hsa-miR-219-1-3p
hsa-miR-219-2-3p
hsa-miR-219-5p
hsa-miR-22
hsa-miR-22*
hsa-miR-220a
hsa-miR-220b
hsa-miR-220c
hsa-miR-221
hsa-miR-221*
hsa-miR-222
hsa-miR-222*
hsa-miR-223
hsa-miR-223*
hsa-miR-224
hsa-miR-23a
hsa-miR-23a*
hsa-miR-23b
hsa-miR-23b*
hsa-miR-24
hsa-miR-24-1*
hsa-miR-24-2*
hsa-miR-25
hsa-miR-25*
hsa-miR-26a
hsa-miR-26a-1*
hsa-miR-26a-2*
hsa-miR-26b
hsa-miR-26b*
hsa-miR-27a
hsa-miR-27a*
hsa-miR-27b
hsa-miR-27b*
hsa-miR-28-3p
hsa-miR-28-5p
hsa-miR-296-3p
hsa-miR-296-5p
hsa-miR-297
hsa-miR-298
hsa-miR-299-3p
hsa-miR-299-5p
hsa-miR-29a
hsa-miR-29a*
hsa-miR-29b
hsa-miR-29b-1*
hsa-miR-29b-2*
hsa-miR-29c
hsa-miR-29c*
hsa-miR-300
hsa-miR-301a
hsa-miR-301b
hsa-miR-302a
hsa-miR-302a*
hsa-miR-302b
hsa-miR-302b*
hsa-miR-302c
hsa-miR-302c*
hsa-miR-302d
hsa-miR-302d*
hsa-miR-302e
hsa-miR-302f
hsa-miR-30a
hsa-miR-30a*
hsa-miR-30b
hsa-miR-30b*
hsa-miR-30c
hsa-miR-30c-1*
hsa-miR-30c-2*
hsa-miR-30d
hsa-miR-30d*
hsa-miR-30e
hsa-miR-30e*
hsa-miR-31
hsa-miR-31*
hsa-miR-32
hsa-miR-32*
hsa-miR-320a
hsa-miR-320b
hsa-miR-320c
hsa-miR-320d
hsa-miR-323-3p
hsa-miR-323-5p
hsa-miR-324-3p
hsa-miR-324-5p
hsa-miR-325
hsa-miR-326
hsa-miR-328
hsa-miR-329
hsa-miR-330-3p
hsa-miR-330-5p
hsa-miR-331-3p
hsa-miR-331-5p
hsa-miR-335
hsa-miR-335*
hsa-miR-337-3p
hsa-miR-337-5p
hsa-miR-338-3p
hsa-miR-338-5p
hsa-miR-339-3p
hsa-miR-339-5p
hsa-miR-33a
hsa-miR-33a*
hsa-miR-33b
hsa-miR-33b*
hsa-miR-340
hsa-miR-340*
hsa-miR-342-3p
hsa-miR-342-5p
hsa-miR-345
hsa-miR-346
hsa-miR-34a
hsa-miR-34a*
hsa-miR-34b
hsa-miR-34b*
hsa-miR-34c-3p
hsa-miR-34c-5p
hsa-miR-361-3p
hsa-miR-361-5p
hsa-miR-362-3p
hsa-miR-362-5p
hsa-miR-363
hsa-miR-363*
hsa-miR-365
hsa-miR-367
hsa-miR-367*
hsa-miR-369-3p
hsa-miR-369-5p
hsa-miR-370
hsa-miR-371-3p
hsa-miR-371-5p
hsa-miR-372
hsa-miR-373
hsa-miR-373*
hsa-miR-374a
hsa-miR-374a*
hsa-miR-374b
hsa-miR-374b*
hsa-miR-375
hsa-miR-376a
hsa-miR-376a*
hsa-miR-376b
hsa-miR-376c
hsa-miR-377
hsa-miR-377*
hsa-miR-378
hsa-miR-378*
hsa-miR-379
hsa-miR-379*
hsa-miR-380
hsa-miR-380*
hsa-miR-381
hsa-miR-382
hsa-miR-383
hsa-miR-384
hsa-miR-409-3p
hsa-miR-409-5p
hsa-miR-410
hsa-miR-411
hsa-miR-411*
hsa-miR-412
hsa-miR-421
hsa-miR-422a
hsa-miR-423-3p
hsa-miR-423-5p
hsa-miR-424
hsa-miR-424*
hsa-miR-425
hsa-miR-425*
hsa-miR-429
hsa-miR-431
hsa-miR-431*
hsa-miR-432
hsa-miR-432*
hsa-miR-433
hsa-miR-448
hsa-miR-449a
hsa-miR-449b
hsa-miR-450a
hsa-miR-450b-3p
hsa-miR-450b-5p
hsa-miR-451
hsa-miR-452
hsa-miR-452*
hsa-miR-453
hsa-miR-454
hsa-miR-454*
hsa-miR-455-3p
hsa-miR-455-5p
hsa-miR-483-3p
hsa-miR-483-5p
hsa-miR-484
hsa-miR-485-3p
hsa-miR-485-5p
hsa-miR-486-3p
hsa-miR-486-5p
hsa-miR-487a
hsa-miR-487b
hsa-miR-488
hsa-miR-488*
hsa-miR-489
hsa-miR-490-3p
hsa-miR-490-5p
hsa-miR-491-3p
hsa-miR-491-5p
hsa-miR-492
hsa-miR-493
hsa-miR-493*
hsa-miR-494
hsa-miR-495
hsa-miR-496
hsa-miR-497
hsa-miR-497*
hsa-miR-498
hsa-miR-499-3p
hsa-miR-499-5p
hsa-miR-500
hsa-miR-500*
hsa-miR-501-3p
hsa-miR-501-5p
hsa-miR-502-3p
hsa-miR-502-5p
hsa-miR-503
hsa-miR-504
hsa-miR-505
hsa-miR-505*
hsa-miR-506
hsa-miR-507
hsa-miR-508-3p
hsa-miR-508-5p
hsa-miR-509-3-5p
hsa-miR-509-3p
hsa-miR-509-5p
hsa-miR-510
hsa-miR-511
hsa-miR-512-3p
hsa-miR-512-5p
hsa-miR-513a-3p
hsa-miR-513a-5p
hsa-miR-513b
hsa-miR-513c
hsa-miR-514
hsa-miR-515-3p
hsa-miR-515-5p
hsa-miR-516a-3p
hsa-miR-516a-5p
hsa-miR-516b
hsa-miR-516b*
hsa-miR-517*
hsa-miR-517a
hsa-miR-517b
hsa-miR-517c
hsa-miR-518a-3p
hsa-miR-518a-5p
hsa-miR-518b
hsa-miR-518c
hsa-miR-518c*
hsa-miR-518d-3p
hsa-miR-518d-5p
hsa-miR-518e
hsa-miR-518e*
hsa-miR-518f
hsa-miR-518f*
hsa-miR-519a
hsa-miR-519a*
hsa-miR-519b-3p
hsa-miR-519b-5p
hsa-miR-519c-3p
hsa-miR-519c-5p
hsa-miR-519d
hsa-miR-519e
hsa-miR-519e*
hsa-miR-520a-3p
hsa-miR-520a-5p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520c-5p
hsa-miR-520d-3p
hsa-miR-520d-5p
hsa-miR-520e
hsa-miR-520f
hsa-miR-520g
hsa-miR-520h
hsa-miR-521
hsa-miR-522
hsa-miR-522*
hsa-miR-523
hsa-miR-523*
hsa-miR-524-3p
hsa-miR-524-5p
hsa-miR-525-3p
hsa-miR-525-5p
hsa-miR-526a
hsa-miR-526b
hsa-miR-526b*
hsa-miR-527
hsa-miR-532-3p
hsa-miR-532-5p
hsa-miR-539
hsa-miR-541
hsa-miR-541*
hsa-miR-542-3p
hsa-miR-542-5p
hsa-miR-543
hsa-miR-544
hsa-miR-545
hsa-miR-545*
hsa-miR-548a-3p
hsa-miR-548a-5p
hsa-miR-548b-3p
hsa-miR-548b-5p
hsa-miR-548c-3p
hsa-miR-548c-5p
hsa-miR-548d-3p
hsa-miR-548d-5p
hsa-miR-548e
hsa-miR-548f
hsa-miR-548g
hsa-miR-548h
hsa-miR-548i
hsa-miR-548j
hsa-miR-548k
hsa-miR-548l
hsa-miR-548m
hsa-miR-548n
hsa-miR-548o
hsa-miR-548p
hsa-miR-549
hsa-miR-550
hsa-miR-550*
hsa-miR-551a
hsa-miR-551b
hsa-miR-551b*
hsa-miR-552
hsa-miR-553
hsa-miR-554
hsa-miR-555
hsa-miR-556-3p
hsa-miR-556-5p
hsa-miR-557
hsa-miR-558
hsa-miR-559
hsa-miR-561
hsa-miR-562
hsa-miR-563
hsa-miR-564
hsa-miR-566
hsa-miR-567
hsa-miR-568
hsa-miR-569
hsa-miR-570
hsa-miR-571
hsa-miR-572
hsa-miR-573
hsa-miR-574-3p
hsa-miR-574-5p
hsa-miR-575
hsa-miR-576-3p
hsa-miR-576-5p
hsa-miR-577
hsa-miR-578
hsa-miR-579
hsa-miR-580
hsa-miR-581
hsa-miR-582-3p
hsa-miR-582-5p
hsa-miR-583
hsa-miR-584
hsa-miR-585
hsa-miR-586
hsa-miR-587
hsa-miR-588
hsa-miR-589
hsa-miR-589*
hsa-miR-590-3p
hsa-miR-590-5p
hsa-miR-591
hsa-miR-592
hsa-miR-593
hsa-miR-593*
hsa-miR-595
hsa-miR-596
hsa-miR-597
hsa-miR-598
hsa-miR-599
hsa-miR-600
hsa-miR-601
hsa-miR-602
hsa-miR-603
hsa-miR-604
hsa-miR-605
hsa-miR-606
hsa-miR-607
hsa-miR-608
hsa-miR-609
hsa-miR-610
hsa-miR-611
hsa-miR-612
hsa-miR-613
hsa-miR-614
hsa-miR-615-3p
hsa-miR-615-5p
hsa-miR-616
hsa-miR-616*
hsa-miR-617
hsa-miR-618
hsa-miR-619
hsa-miR-620
hsa-miR-621
hsa-miR-622
hsa-miR-623
hsa-miR-624
hsa-miR-624*
hsa-miR-625
hsa-miR-625*
hsa-miR-626
hsa-miR-627
hsa-miR-628-3p
hsa-miR-628-5p
hsa-miR-629
hsa-miR-629*
hsa-miR-630
hsa-miR-631
hsa-miR-632
hsa-miR-633
hsa-miR-634
hsa-miR-635
hsa-miR-636
hsa-miR-637
hsa-miR-638
hsa-miR-639
hsa-miR-640
hsa-miR-641
hsa-miR-642
hsa-miR-643
hsa-miR-644
hsa-miR-645
hsa-miR-646
hsa-miR-647
hsa-miR-648
hsa-miR-649
hsa-miR-650
hsa-miR-651
hsa-miR-652
hsa-miR-653
hsa-miR-654-3p
hsa-miR-654-5p
hsa-miR-655
hsa-miR-656
hsa-miR-657
hsa-miR-658
hsa-miR-659
hsa-miR-660
hsa-miR-661
hsa-miR-662
hsa-miR-663
hsa-miR-663b
hsa-miR-664
hsa-miR-664*
hsa-miR-665
hsa-miR-668
hsa-miR-671-3p
hsa-miR-671-5p
hsa-miR-675
hsa-miR-675b
hsa-miR-7
hsa-miR-7-1*
hsa-miR-7-2*
hsa-miR-708
hsa-miR-708*
hsa-miR-720
hsa-miR-744
hsa-miR-744*
hsa-miR-758
hsa-miR-760
hsa-miR-765
hsa-miR-766
hsa-miR-767-3p
hsa-miR-767-5p
hsa-miR-769-3p
hsa-miR-769-5p
hsa-miR-770-5p
hsa-miR-802
hsa-miR-873
hsa-miR-874
hsa-miR-875-3p
hsa-miR-875-5p
hsa-miR-876-3p
hsa-miR-876-5p
hsa-miR-877
hsa-miR-877*
hsa-miR-885-3p
hsa-miR-885-5p
hsa-miR-886-3p
hsa-miR-886-5p
hsa-miR-887
hsa-miR-888
hsa-miR-888*
hsa-miR-889
hsa-miR-890
hsa-miR-891a
hsa-miR-891b
hsa-miR-892a
hsa-miR-892b
hsa-miR-9
hsa-miR-9*
hsa-miR-920
hsa-miR-921
hsa-miR-922
hsa-miR-923
hsa-miR-924
hsa-miR-92a
hsa-miR-92a-1*
hsa-miR-92a-2*
hsa-miR-92b
hsa-miR-92b*
hsa-miR-93
hsa-miR-93*
hsa-miR-933
hsa-miR-934
hsa-miR-935
hsa-miR-936
hsa-miR-937
hsa-miR-938
hsa-miR-939
hsa-miR-940
hsa-miR-941
hsa-miR-942
hsa-miR-943
hsa-miR-944
hsa-miR-95
hsa-miR-96
hsa-miR-96*
hsa-miR-98
hsa-miR-99a
hsa-miR-99a*
hsa-miR-99b
hsa-miR-99b*
Selected miRNAs
Choose if each subset must contain all the selected miRNAs (AND) or some of them (OR): AND
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Choose the miRNA association criteria: Processes
Broad Phenotypes (Diseases)
Customized Search
Enter your personal set of miRNA/target pairs. Your data will be temporarily stored and used in all your session queries. The other users won't be able to see your data. Please enter one pair per row with the following format:
miRNA_name::target_name (e.g. hsa-miR-15a::apex2)
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You can browse miRNAs, genes, diseases, ontologies and tissues by clicking one of the following buttons
miRNAs
Genes
Diseases
Functions
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tissues (pre-miRNAs)
tissues (mature miRNAs)
Last Update:
February, 2009
Resource
Version or Release Date
Reference
Genetic Association Database
December 2008
Becker KG et al. The genetic association database. Nat Genetics 2004;36(5):431-432
Gene Ontology
October 2008
Ashburner M et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genetics 2000;25(1):25-29
Mammalian miRNA atlas
June 2007
Landgraf P et al. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007;129(7):1401-14
miRanda
September 2008 Release
John B et al. Human MicroRNA targets. PLoS Biology 2004;2(11):1862-1879
miRBase
v 12.0 (September 2008)
Griffiths-Jones S et al. miRBase: tools for microRNA genomics. Nucleic Acids Res 2008;36(Database issue):D154-8
miRecords
v 1.0
Xiao F et al. miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res. 2009;37(Database issue):D105-10
NCBI Gene Database
September 2008
Maglott D et al. Entrez Gene: gene-centered information at NCBI. Nucleic Acids Res. 2005; 33(Database Issue):D54–D58
NCBI Nucleotide Database
September 2008
Benson DA et al. GenBank. Nucleic Acids Res. 2008; 36(Database issue):D25-30
PicTar
2006 Release
Krek A et al. Combinatorial microRNA target predictions. Nat Genetics 2005;37:495-500
TargetScan
v 4.2 (April 2008)
Lewis BP et al. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005;120:15-20
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